Accepted papers
BMC Bioinformatics released our RCG-2013 publications on Monday, October 14th, 2013.
http://www.biomedcentral.com/bmcbioinformatics/supplements/14/S15
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Transcript features alone enable accurate prediction and understanding of gene expression in S. cerevisiae
Hadas Zur, Tamir Tuller
BMC Bioinformatics 2013, 14(Suppl 15):S1 (15 October 2013)
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The dynamics of alternative pathways to compensatory substitution
Chris A Nasrallah
BMC Bioinformatics 2013, 14(Suppl 15):S2 (15 October 2013)
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On the inversion-indel distance
Eyla Willing, Simone Zaccaria, Marília DV Braga, Jens Stoye
BMC Bioinformatics 2013, 14(Suppl 15):S3 (15 October 2013)
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Lateral gene transfer, rearrangement, reconciliation
Murray Patterson, Gergely Szöllősi, Vincent Daubin, Eric Tannier
BMC Bioinformatics 2013, 14(Suppl 15):S4 (15 October 2013)
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Gene tree correction guided by orthology
Manuel Lafond, Magali Semeria, Krister M Swenson, Eric Tannier, Nadia El-Mabrouk
BMC Bioinformatics 2013, 14(Suppl 15):S5 (15 October 2013)
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Fast algorithms and heuristics for phylogenomics under ILS and hybridization
Yun Yu, Nikola Ristic, Luay Nakhleh
BMC Bioinformatics 2013, 14(Suppl 15):S6 (15 October 2013)
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Phase change for the accuracy of the median value in estimating divergence time
Arash Jamshidpey, David Sankoff
BMC Bioinformatics 2013, 14(Suppl 15):S7 (15 October 2013)
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Practical aliquoting of flowering plant genomes
Chunfang Zheng, David Sankoff
BMC Bioinformatics 2013, 14(Suppl 15):S8 (15 October 2013)
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Sorting genomes with rearrangements and segmental duplications through trajectory graphs
Mingfu Shao, Yu Lin, Bernard Moret
BMC Bioinformatics 2013, 14(Suppl 15):S9 (15 October 2013)
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Genome-wide probabilistic reconciliation analysis across vertebrates
Owais Mahmudi, Joel Sjöstrand, Bengt Sennblad, Jens Lagergren
BMC Bioinformatics 2013, 14(Suppl 15):S10 (15 October 2013)
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In silico experimental evolution: a tool to test evolutionary scenarios
Bérénice Batut, David P Parsons, Stephan Fischer, Guillaume Beslon, Carole Knibbe
BMC Bioinformatics 2013, 14(Suppl 15):S11 (15 October 2013)
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Quantitative synteny scoring improves homology inference and partitioning of gene families
Raja Ali, Sayyed Muhammad, Mehmood Khan, Lars Arvestad
BMC Bioinformatics 2013, 14(Suppl 15):S12 (15 October 2013)
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Haploid to diploid alignment for variation calling assessment
Veli Mäkinen, Jani Rahkola
BMC Bioinformatics 2013, 14(Suppl 15):S13 (15 October 2013)
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Disentangling homeologous contigs in allo-tetraploid assembly: application to durum wheat
Vincent Ranwez, Yan Holtz, Gautier Sarah, Morgane Ardisson, Sylvain Santoni, Sylvain Glémin, Muriel Tavaud-Pirra, Jacques David
BMC Bioinformatics 2013, 14(Suppl 15):S15 (15 October 2013)
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Finishing bacterial genome assemblies with Mix
Hayssam Soueidan, Florence Maurier, Alexis Groppi, Pascal Sirand-Pugnet, Florence Tardy, Christine Citti, Virginie Dupuy, Macha Nikolski
BMC Bioinformatics 2013, 14(Suppl 15):S16 (15 October 2013)
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Reconstructing the modular recombination history of Staphylococcus aureus phages
Krister M Swenson, Paul Guertin, Hugo Deschênes, Anne Bergeron
BMC Bioinformatics 2013, 14(Suppl 15):S17 (15 October 2013)
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Mapping proteins in the presence of paralogs using units of coevolution
Mohammed El-Kebir, Tobias Marschall, Inken Wohlers, Murray Patterson, Jaap Heringa, Alexander Schönhuth, Gunnar W Klau
BMC Bioinformatics 2013, 14(Suppl 15):S18 (15 October 2013)
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The dynamics of functional classes of plant genes in rediploidized ancient polyploids
Eric CH Chen, Carlos Buen Abad Najar, Chunfang Zheng, Alex Brandts, Eric Lyons, Haibao Tang, Lorenzo Carretero-Paulet, Victor A Albert, David Sankoff
BMC Bioinformatics 2013, 14(Suppl 15):S19 (15 October 2013)
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